mirror of https://git.freebsd.org/ports.git
parent
903be3df5b
commit
97dcba7265
|
@ -1,6 +1,6 @@
|
|||
PORTNAME= xgboost
|
||||
DISTVERSIONPREFIX= v
|
||||
DISTVERSION= 1.7.6
|
||||
DISTVERSION= 2.0.3
|
||||
CATEGORIES= misc # machine-learning
|
||||
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
|
||||
|
||||
|
@ -11,15 +11,15 @@ WWW= https://xgboost.ai/
|
|||
LICENSE= APACHE20
|
||||
LICENSE_FILE= ${WRKSRC}/../LICENSE
|
||||
|
||||
BUILD_DEPENDS= cmake:devel/cmake-core
|
||||
LIB_DEPENDS= libdmlc.so:devel/dmlc-core \
|
||||
libxgboost.so:misc/xgboost
|
||||
BUILD_DEPENDS= cmake:devel/cmake-core \
|
||||
${PYTHON_PKGNAMEPREFIX}hatchling>=1.12.1:devel/py-hatchling@${PY_FLAVOR}
|
||||
LIB_DEPENDS= libdmlc.so:devel/dmlc-core
|
||||
RUN_DEPENDS= ${PYNUMPY} \
|
||||
${PYTHON_PKGNAMEPREFIX}scipy>0:science/py-scipy@${PY_FLAVOR}
|
||||
TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}scikit-learn>0:science/py-scikit-learn@${PY_FLAVOR}
|
||||
|
||||
USES= compiler:c11 python localbase:ldflags
|
||||
USE_PYTHON= distutils pytest # Python tests are broken because py-scikit-learn is missing the py-threadpoolctl dependency which is also currently broken
|
||||
USE_PYTHON= pep517 autoplist pytest # Python tests are broken because py-scikit-learn is missing the py-threadpoolctl dependency which is also currently broken
|
||||
USE_LDCONFIG= yes
|
||||
|
||||
USE_GITHUB= yes
|
||||
|
@ -27,14 +27,16 @@ GH_ACCOUNT= dmlc
|
|||
|
||||
WRKSRC_SUBDIR= python-package
|
||||
|
||||
PYDISTUTILS_INSTALLARGS= --use-system-libxgboost # this is ignored so that setup.py has to be patched, see https://github.com/dmlc/xgboost/issues/6879
|
||||
LDFLAGS+= -lexecinfo \
|
||||
-ldmlc
|
||||
|
||||
NO_ARCH= yes
|
||||
PYDISTUTILS_INSTALLARGS= --use-system-libxgboost # this is ignored so that setup.py has to be patched, see https://github.com/dmlc/xgboost/issues/6879
|
||||
|
||||
TEST_ENV= ${MAKE_ENV} PYTHONPATH=${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}
|
||||
TEST_WRKSRC= ${WRKSRC}/../tests/python
|
||||
|
||||
post-install:
|
||||
${PYTHON_CMD} -m compileall -d ${PYTHON_SITELIBDIR} ${STAGEDIR}${PYTHON_SITELIBDIR}
|
||||
@${PYTHON_CMD} -m compileall -d ${PYTHON_SITELIBDIR} ${STAGEDIR}${PYTHON_SITELIBDIR}
|
||||
@${STRIP_CMD} ${STAGEDIR}${PYTHON_SITELIBDIR}/xgboost/lib/libxgboost.so
|
||||
|
||||
.include <bsd.port.mk>
|
||||
|
|
|
@ -1,3 +1,3 @@
|
|||
TIMESTAMP = 1687151492
|
||||
SHA256 (dmlc-xgboost-v1.7.6_GH0.tar.gz) = 20acbdc04e5c724884788a51abbc400fc0d8497ae6cb5b404fef4e0d32fe1a0e
|
||||
SIZE (dmlc-xgboost-v1.7.6_GH0.tar.gz) = 1873636
|
||||
TIMESTAMP = 1703054780
|
||||
SHA256 (dmlc-xgboost-v2.0.3_GH0.tar.gz) = 94e5deb27133459ec4172f3fed83971383366ad2a7d646b6f0b51f63484c5138
|
||||
SIZE (dmlc-xgboost-v2.0.3_GH0.tar.gz) = 1988289
|
||||
|
|
|
@ -1,38 +0,0 @@
|
|||
--- setup.py.orig 2022-08-22 08:36:38 UTC
|
||||
+++ setup.py
|
||||
@@ -60,7 +60,7 @@ def copy_tree(src_dir: str, target_dir: str) -> None:
|
||||
|
||||
src = os.path.join(src_dir, 'src')
|
||||
inc = os.path.join(src_dir, 'include')
|
||||
- dmlc_core = os.path.join(src_dir, 'dmlc-core')
|
||||
+ #dmlc_core = os.path.join(src_dir, 'dmlc-core')
|
||||
gputreeshap = os.path.join(src_dir, "gputreeshap")
|
||||
rabit = os.path.join(src_dir, 'rabit')
|
||||
cmake = os.path.join(src_dir, 'cmake')
|
||||
@@ -68,7 +68,7 @@ def copy_tree(src_dir: str, target_dir: str) -> None:
|
||||
|
||||
clean_copy_tree(src, os.path.join(target_dir, 'src'))
|
||||
clean_copy_tree(inc, os.path.join(target_dir, 'include'))
|
||||
- clean_copy_tree(dmlc_core, os.path.join(target_dir, 'dmlc-core'))
|
||||
+ #clean_copy_tree(dmlc_core, os.path.join(target_dir, 'dmlc-core'))
|
||||
clean_copy_tree(gputreeshap, os.path.join(target_dir, "gputreeshap"))
|
||||
clean_copy_tree(rabit, os.path.join(target_dir, 'rabit'))
|
||||
clean_copy_tree(cmake, os.path.join(target_dir, 'cmake'))
|
||||
@@ -142,7 +142,7 @@ class BuildExt(build_ext.build_ext): # pylint: disabl
|
||||
|
||||
def build_cmake_extension(self) -> None:
|
||||
'''Configure and build using CMake'''
|
||||
- if USER_OPTIONS['use-system-libxgboost'][2]:
|
||||
+ if True or USER_OPTIONS['use-system-libxgboost'][2]: # see https://github.com/dmlc/xgboost/issues/6879
|
||||
self.logger.info('Using system libxgboost.')
|
||||
return
|
||||
|
||||
@@ -239,7 +239,7 @@ class InstallLib(install_lib.install_lib):
|
||||
def install(self) -> List[str]:
|
||||
outfiles = super().install()
|
||||
|
||||
- if USER_OPTIONS['use-system-libxgboost'][2] != 0:
|
||||
+ if True or USER_OPTIONS['use-system-libxgboost'][2] != 0: # see https://github.com/dmlc/xgboost/issues/6879
|
||||
self.logger.info('Using system libxgboost.')
|
||||
lib_path = os.path.join(sys.prefix, 'lib')
|
||||
msg = 'use-system-libxgboost is specified, but ' + lib_name() + \
|
|
@ -1,9 +1,9 @@
|
|||
--- xgboost/libpath.py.orig 2021-04-20 00:31:38 UTC
|
||||
--- xgboost/libpath.py.orig 2023-12-19 07:49:41 UTC
|
||||
+++ xgboost/libpath.py
|
||||
@@ -5,6 +5,7 @@ import os
|
||||
import platform
|
||||
from typing import List
|
||||
import sys
|
||||
from typing import List
|
||||
+import sysconfig # from https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=247408#c0
|
||||
|
||||
|
||||
|
@ -15,5 +15,5 @@
|
|||
+ sysconfig.get_config_var('LIBDIR'), # from https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=247408#c0
|
||||
+ os.path.join(sys.prefix, 'xgboost'),
|
||||
# normal, after installation `lib` is copied into Python package tree.
|
||||
os.path.join(curr_path, 'lib'),
|
||||
os.path.join(curr_path, "lib"),
|
||||
# editable installation, no copying is performed.
|
||||
|
|
|
@ -1,50 +0,0 @@
|
|||
%%PYTHON_SITELIBDIR%%/xgboost/VERSION
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/__init__.py
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/__pycache__/__init__%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/__pycache__/_typing%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/__pycache__/callback%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/__pycache__/collective%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/__pycache__/compat%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/__pycache__/config%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/__pycache__/core%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/__pycache__/dask%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/__pycache__/data%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/__pycache__/federated%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/__pycache__/libpath%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/__pycache__/plotting%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/__pycache__/rabit%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/__pycache__/sklearn%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/__pycache__/testing%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/__pycache__/tracker%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/__pycache__/training%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/_typing.py
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/callback.py
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/collective.py
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/compat.py
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/config.py
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/core.py
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/dask.py
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/data.py
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/federated.py
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/libpath.py
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/plotting.py
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/py.typed
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/rabit.py
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/sklearn.py
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/spark/__init__.py
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/spark/__pycache__/__init__%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/spark/__pycache__/core%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/spark/__pycache__/data%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/spark/__pycache__/estimator%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/spark/__pycache__/model%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/spark/__pycache__/params%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/spark/__pycache__/utils%%PYTHON_EXT_SUFFIX%%.pyc
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/spark/core.py
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/spark/data.py
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/spark/estimator.py
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/spark/model.py
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/spark/params.py
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/spark/utils.py
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/testing.py
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/tracker.py
|
||||
%%PYTHON_SITELIBDIR%%/xgboost/training.py
|
|
@ -1,6 +1,6 @@
|
|||
PORTNAME= xgboost
|
||||
DISTVERSIONPREFIX= v
|
||||
DISTVERSION= 1.7.6
|
||||
DISTVERSION= 2.0.3
|
||||
CATEGORIES= misc # machine-learning
|
||||
|
||||
MAINTAINER= yuri@FreeBSD.org
|
||||
|
|
|
@ -1,6 +1,6 @@
|
|||
TIMESTAMP = 1687149910
|
||||
SHA256 (dmlc-xgboost-v1.7.6_GH0.tar.gz) = 20acbdc04e5c724884788a51abbc400fc0d8497ae6cb5b404fef4e0d32fe1a0e
|
||||
SIZE (dmlc-xgboost-v1.7.6_GH0.tar.gz) = 1873636
|
||||
TIMESTAMP = 1703054318
|
||||
SHA256 (dmlc-xgboost-v2.0.3_GH0.tar.gz) = 94e5deb27133459ec4172f3fed83971383366ad2a7d646b6f0b51f63484c5138
|
||||
SIZE (dmlc-xgboost-v2.0.3_GH0.tar.gz) = 1988289
|
||||
SHA256 (NVlabs-cub-af39ee2_GH0.tar.gz) = 3444f1d0af16d3680bf5089c1a91e707769d946580b80f12463860366fb6884b
|
||||
SIZE (NVlabs-cub-af39ee2_GH0.tar.gz) = 413215
|
||||
SHA256 (rapidsai-gputreeshap-acb5be3_GH0.tar.gz) = c2b67f8f398000570cac6b9d82a0bdab251105391602a3e07fd497c5e61534c4
|
||||
|
|
|
@ -1,11 +1,12 @@
|
|||
bin/xgboost
|
||||
include/xgboost/base.h
|
||||
include/xgboost/c_api.h
|
||||
include/xgboost/cache.h
|
||||
include/xgboost/collective/socket.h
|
||||
include/xgboost/context.h
|
||||
include/xgboost/data.h
|
||||
include/xgboost/feature_map.h
|
||||
include/xgboost/gbm.h
|
||||
include/xgboost/generic_parameters.h
|
||||
include/xgboost/global_config.h
|
||||
include/xgboost/host_device_vector.h
|
||||
include/xgboost/intrusive_ptr.h
|
||||
|
@ -17,6 +18,7 @@ include/xgboost/linear_updater.h
|
|||
include/xgboost/logging.h
|
||||
include/xgboost/metric.h
|
||||
include/xgboost/model.h
|
||||
include/xgboost/multi_target_tree_model.h
|
||||
include/xgboost/objective.h
|
||||
include/xgboost/parameter.h
|
||||
include/xgboost/predictor.h
|
||||
|
|
Loading…
Reference in New Issue